Pubblicazioni dell'autore: Francesco Abate [Rubrica]

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Numero di pubblicazioni : 28.

In corso di stampa

Articolo di rivista T. Palomero, L. Couronné, Hossein Khiabanian, M. Kim, Alberto Ambesi-Impiombato, A. Perez-Garcia, Zachary Wayne Carpenter, Francesco Abate, M. Allegretta, Je Haydu, X. Jiang, Is Lossos, Balbin Nicolas, Bhagat Bastard, Ma Piris, E. Campo, O. Bernard, Rabadan R Raul, Aa Ferrando
Recurrent mutations in epigenetic regulators, RHOA and FYN kinase in peripheral T cell lymphomas. In: NATURE GENETICS. - ISSN 1061-4036 (In stampa)
Web of Science: 122 - Scopus: 145

2014

Articolo di rivista Francesco Abate; Sakellarios Zairis; Elisa Ficarra; Andrea Acquaviva; Chris H Wiggins; Veronique Frattini; Anna Lasorella; Antonio Iavarone; Giorgio Inghirami; Raul Rabadan (2014)
Pegasus: a comprehensive annotation and prediction tool for detection of driver gene fusions in cancer. In: BMC SYSTEMS BIOLOGY, vol. 8 n. 97. - ISSN 1752-0509
Web of Science: 11 - Scopus: 12
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2013

Articolo di rivista Abate F.; Acquaviva A.; Ficarra E.; Piva R.; Macii E. (2013)
Gelsius: A Literature-Based Workflow for Determining Quantitative Associations between Genes and Biological Processes. In: IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, vol. 10 n. 3, pp. 619-631. - ISSN 1545-5963
Web of Science: 0 - Scopus: 0

Articolo in atti di convegno Abate F.; Ficarra E.; Acquaviva A.; Macii E. (2013)
Improving Latent Semantic Analysis of Biomedical Literature Integrating UMLS Metathesaurus and Biomedical Pathways Databases. In: 4th International Joint Conference, BIOSTEC, Rome, Italy, January 26-29, 2011. pp. 173-187

Articolo di rivista Francesco Abate; Andrea Acquaviva; Elisa Ficarra; Enrico Macii (2013)
Integration of Literature with Heterogeneous Information for Genes Correlation Scoring. In: ACM JOURNAL ON EMERGING TECHNOLOGIES IN COMPUTING SYSTEMS, vol. 9 n. 4. - ISSN 1550-4832
Web of Science: 0 - Scopus: 0

Articolo di rivista T. Palomero;L. Couronne;H. Khiabanian;M. Kim;A. Ambesi;Z. Carpenter;F. Abate;M. Allegretta;I.S. Lossos;C. Nicolas;M. Balbin;C. Bastard;G. Bhagat;M.A. A.;E. Campo;O.A. Bernard;R. Rabadan (2013)
Recurrent Rhoa Mutations In Peripheral T-Cell Lymphoma. In: BLOOD, vol. 122, 846-. - ISSN 0006-4971
Web of Science: 1

Articolo di rivista Veronique Frattini;Vladimir Trifonov;Joseph Minhow Chan;Angelica Castano;Marie Lia;Francesco Abate;Stephen T Keir;Alan X Ji;Pietro Zoppoli;Francesco Niola;Carla Danussi;Igor Dolgalev;Paola Porrati;Serena Pellegatta;Adriana Heguy;Gaurav Gupta;David J Pisapia;Peter Canoll;Jeffrey N Bruce;Roger E Mclendon;Hai Yan;Ken Aldape;Gaetano Finocchiaro;Tom Mikkelsen;Gilbert G Privé;Darell D Bigner;Anna Lasorella;Raul Rabadan;Antonio Iavarone (2013)
The integrated landscape of driver genomic alterations in glioblastoma. In: NATURE GENETICS. - ISSN 1061-4036
Web of Science: 119 - Scopus: 130

Articolo in atti di convegno Giulia Paciello; Elisa Ficarra; Alberto Zamò; Chiara Pighi; Carmelo Foti; Francesco Abate; Enrico Macii; Andrea Acquaviva (2013)
A novel pipeline for V(D)J junction identification using RNA-Seq paired-end reads. In: Bioinformatics 2013, International Conference on Bioinformatics Models, Methods and Algorithms, Barcelona, Spain, 11-14 February 2013.
Web of Science: 0 - Scopus: 0
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2012

Articolo di rivista F. Tabbó; A. Barreca; R. Piva; G. Inghirami; R. Bruna; D. Corino; D. Cortese; R. Crescenzo; G. Cuccuru; F. Di Giacomo; A. Fioravanti; M. Ladetto; I. Landra; K. Messana; R. Machiorlatti; B. Martinoglio; E. Medico; M. Mossino; E. Pellegrino; M. Todaro; P. Campisi; L. Chiusa; A. Chiappella; D. Novero; U. Vitolo; F. Abate; A. Acquaviva; E. Ficarra; R. Freilone; M. Chilosi; A. Zamó; F. Facchetti; S. Lonardi; A. De Chiara; F. Fulciniti; C. Doglioni; M. Ponzoni; L. Agnelli; A. Neri; K. Todoerti; C. Agostinelli; P.P. Piccaluga; S. Pileri; B. Falini; E. Tiacci; P. Van Loo; T. Tousseyn; C. De Wolf-Peeters; E. Geissinger; H.K. Muller-Hermelink; A. Rosenwald; M.A. Pirisand; M.E. Rodriguez; F. Bertoni; M. Boi; I. Kwee (2012)
ALK signaling and target therapy in anaplastic large cell lymphoma. In: FRONTIERS IN ONCOLOGY. - ISSN 2234-943X
Scopus: 21

Articolo di rivista Abate F.; Acquaviva A.; Paciello G.; Foti C.; Ficarra E.; Ferrarini A.; Delle Donne M.; Iacobucci I.; Soverini S.; Martinelli G.; Macii E. (2012)
Bellerophontes: a RNA-seq data analysis framework tor chimeric transcripts discovery base on accurate fusion model. In: BIOINFORMATICS, vol. 28 n. 16, pp. 2114-2121. - ISSN 1367-4803 [Disponibilità ristretta]
Web of Science: 15 - Scopus: 14
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Articolo in atti di convegno Terzo O, Mossucca L, Acquaviva A, Abate F, Provenzano R (2012)
A Cloud Infrastructure for Optimization of a Massive Parallel Sequencing Workflow. In: 2012 12th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (ccgrid 2012), Ottawa, Canada, May 13-May 16 2012.
Scopus: 1
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Articolo in atti di convegno Patti E., Acquaviva A., Abate F., Osello A., Cocuccio A., Jahn M., Jentsch M., Macii E. (2012)
Middleware Services for Network Interoperability in Smart Energy Efficient Buildings. In: DATE'12, Design, Automation & Test in Europe, Dresden, Germany, March 12th-16th, 2012. pp. 338-340
Scopus: 0

Articolo in atti di convegno Abate F.; Paciello G.; Acquaviva A.; Ficarra E.; Ferrarini A.; Delledonne M.; Macii E. (2012)
A NOVEL ANALYSIS FLOW FOR FUSED TRANSCRIPTS DISCOVERY FROM PAIRED-END RNA-SEQ DATA. In: International Conference on Bioinformatics Models, Methods and Algorithms (BIOINFORMATICS 2012), Vilamoura, Algarve (Portugal), 1-4 February 2012. pp. 331-334
Web of Science: 0 - Scopus: 0

Articolo in atti di convegno Terzo O, Mossucca L, Acquaviva A, Abate F, Ficarra E, Provenzano R (2012)
Optimizing Splicing Junction Detection in Next Generation Sequencing Data on a Virtual-GRID Infrastructure. In: The 6th International Conference on Bioinformatics and Biomedical Engineering, Shanghai, 17-20 My 2012.
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Articolo in atti di convegno Terzo O, Mossucca L, Acquaviva A, Abate F, Ficarra E, Provenzano R (2012)
Reverse Engineering of TopHat: Splice Junction Mapper for Improving Computational Aspect. In: ISMS 2012 - 3rd International Conference on Intelligent Systems, Modelling and Simulation, Kota Kinabalu, 8 – 10 February 2012.
Scopus: 1
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Articolo in atti di convegno Terzo O, Mossucca L, Acquaviva A, Abate F, Provenzano R (2012)
Virtual Environment for Next Generation Sequencing Analysis. In: The Eighth International Conference on Networking and Services, St. Maarten, Netherlands Antilles, March 25-30, 2012.
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2011

Articolo in atti di convegno Francesco Abate; Elisa Ficarra; Andrea Acquaviva; Enrico Macii (2011)
A New Latent Semantic Analysis Based Methodology For Knowledge Extraction From Biomedical Literature And Biological Pathways Databases. In: BIOINFORMATICS, International Conference on Bionformatics Models, Methods and Algorithms, Rome, Italy, 26-29 January 2011. pp. 66-74
Web of Science: 0 - Scopus: 0

Articolo in atti di convegno Terzo O; Mossucca L; Ruiu P; Abate F; Acquaviva A; Ficarra E; Macii E (2011)
Next Generation Sequencing on Hybrid Grid Cloud Infrastructure. In: 2011 World Congress on Engineering and Technology (CET), Shanghai, China, 28 Oct - 2 Nov 2011. pp. 572-575

Articolo in atti di convegno Terzo O.; Mossucca L.; Ruiu P.; Abate F.; Acquaviva A.; Ficarra E.; Macii E. (2011)
An effective grid infrastructure for efficiently support high throughput sequencing analysis. In: 2nd. International Conference on Engineering and Meta-Engineering (ICEME 2011), Orlando (USA), March 27th - 30th, 2011.
Web of Science: 0

Articolo in atti di convegno F. Abate; A. Acquaviva; E. Ficarra; G. Paciello; E. Macii; A. Ferrarini; M. Delledonne; S. Soverini; G. Martinelli (2011)
A novel framework for chimeric transcript detection based on accurate gene fusion model. In: IEEE International Conference on Bioinformatics and Biomedicine, Atlanta, Georgia (USA), 12-15 Nov. 2011. pp. 34-41
Scopus: 0
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2010

Articolo in atti di convegno Abate F., Ficarra E., Acquaviva A., Macii E. (2010)
An Automated Tool for Scoring Biomedical Terms Correlation Based on Semantic Analysis. In: 3th International Workshop on Intelligent Informatics in Biology and Medicine, Krakow, Poland, February 15th - 18th. pp. 700-705
Web of Science: 0 - Scopus: 1

2009

Articolo in atti di convegno L. Ciganda; F. Abate; P. Bernardi; M. Bruno; Sonza Reorda M. (2009)
An Enhanced FPGA-Based Low-Cost Tester Platform Exploiting Effective Test Data Compression for SoCs. In: 12th IEEE Symposium on Design and Diagnostics of Electronic Systems, Liberec, Czech Republic, April 2009. pp. 258-263
Web of Science: 6 - Scopus: 6

Articolo di rivista Abate F.; L. Sterpone; C.A. Lisboa; L. Carro; M. Violante (2009)
New techniques for improving the performance of the lockstep architecture for SEEs mitigation in FPGA embedded processors. In: IEEE TRANSACTIONS ON NUCLEAR SCIENCE, vol. 56, pp. 1992-2000. - ISSN 0018-9499
Web of Science: 8 - Scopus: 18

Articolo in atti di convegno Ciganda L.; Abate F.; Bernardi P.; Bruno M.; Sonza Reorda M. (2009)
An enhanced FPGA-based low-cost tester platform exploiting effective test data compression for SoCs. In: 12th International Symposium on Design and Diagnostics of Electronic Circuits & Systems, 2009, Liberec (CZ), 15-17 April 2009. pp. 258-263
Web of Science: 6 - Scopus: 6

Articolo in atti di convegno Abate F.; Lima Kastensmidt F; Sterpone L; Violante M (2009)
A study of the Single Event Effects Impact on Functional Mapping within Flash-based FPGAs. In: Design, Automation and Test in Europe, 20-24 April 2009.
Web of Science: 2 - Scopus: 5

2008

Articolo in atti di convegno Abate F.; Violante M (2008)
Coping with Obsolescence of Processor Cores in Critical Applications. In: IEEE International Symposium on Defect and Fault Tolerance of VLSI Systems, 1-3 Oct. 2008.
Web of Science: 2 - Scopus: 2

Articolo in atti di convegno Abate F.; Sterpone L; Violante M (2008)
Experimental Validation of Lockstep, Checkpoint, and Rollback Recovery to Detect and Correct Soft Errors in System-On-Programmable-Chips. In: Radiation Effects on Components and Systems, 10-12 September.

Articolo di rivista F. Abate; Sterpone L.; M. Violante (2008)
A New Mitigation Approach For Soft Errors In Embedded Processors. In: IEEE TRANSACTIONS ON NUCLEAR SCIENCE, vol. 55, pp. 2063-2069. - ISSN 0018-9499
Web of Science: 6 - Scopus: 6

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